Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monocarboxylate 2-oxoacid-binding periplasmic protein precursor | PEV8663_02338 | Not Available | Negative | 2315342 - 2316376 | 38506.3 |
| sialic acid trap transporter permease protein siat | PEV8663_02339 | Not Available | Negative | 2316431 - 2317756 | 48283.6 |
| tripartite atp-independent periplasmic transporters, dctq component | PEV8663_02340 | Not Available | Negative | 2317746 - 2318264 | 19757.8 |
| n-formylglutamate amidohydrolase | PEV8663_02341 | Not Available | Negative | 2318261 - 2319028 | 27890.1 |
| dna-binding transcriptional repressor rpir | PEV8663_02342 | Not Available | Positive | 2319103 - 2319984 | 32681.1 |
| asnc family protein | PEV8663_02343 | Not Available | Negative | 2320084 - 2320320 | 9038.88 |
| kynureninase | PEV8663_02344 | Not Available | Negative | 2320331 - 2321527 | 42980.8 |
| rutc family protein | PEV8663_02345 | Not Available | Negative | 2321524 - 2321934 | 14679.6 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | PEV8663_02346 | Not Available | Negative | 2321931 - 2322338 | 15156.1 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PEV8663_02347 | Not Available | Negative | 2322342 - 2323031 | 24544.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
