Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PEV8663_02308 | Not Available | Negative | 2282485 - 2282844 | 12574.1 |
| xylose isomerase | PEV8663_02309 | Not Available | Negative | 2283032 - 2284339 | 48237.6 |
| ribose import atp-binding protein rbsa | PEV8663_02310 | Not Available | Negative | 2284398 - 2285153 | 26902.4 |
| xylose transport system permease protein xylh | PEV8663_02311 | Not Available | Negative | 2285167 - 2286432 | 44175.6 |
| d-xylose-binding periplasmic protein precursor | PEV8663_02312 | Not Available | Negative | 2286584 - 2287597 | 34594.8 |
| n-acetylglucosamine repressor | PEV8663_02313 | Not Available | Positive | 2287817 - 2289040 | 44202.9 |
| aspic and unbv | PEV8663_02314 | Not Available | Positive | 2289030 - 2290538 | 53849.7 |
| cytochrome c551 peroxidase precursor | PEV8663_02315 | Not Available | Negative | 2290555 - 2291859 | 46906.7 |
| xylulose kinase | PEV8663_02316 | Not Available | Negative | 2291856 - 2293301 | 50875.4 |
| elongation factor 4 | PEV8663_02317 | Not Available | Positive | 2293562 - 2295364 | 66848.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
