Pelagimonas varians strain CECT 8663

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas varians strain CECT 8663 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain exhibits mesophilic growth, with an optimal temperature for proliferation identified at 29°C. The genomic structure of Pelagimonas varians strain CECT 8663 is notable for having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and survival in specific ecological niches. The strain is cataloged under the accession number FXYH00000000.1, which serves as a reference for its genomic data. Understanding the traits of Pelagimonas varians strain CECT 8663 can offer insights into its ecological role, particularly in marine environments where similar aerobic, mesophilic bacteria are often integral to nutrient cycling and organic matter degradation. The reliance on aerobic conditions suggests that this strain may play a significant role in the decomposition of organic materials in oxygen-rich aquatic ecosystems, contributing to the overall health and function of these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas varians
Strainstrain CECT 8663

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagimonas varians strain CECT 8663 genome assembly, contig:

Gene Summary

Adenine Count

1099218 bp

Thymine Count

1095060 bp

Guanine Count

1341998 bp

Cytosine Count

1360831 bp

Genome Length

4897107 bp

Protein-coding Genes

4651 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPEV8663_02009Not AvailablePositive1986792 - 198735820641.1
glycine--trna ligase beta subunitPEV8663_02010Not AvailablePositive1987358 - 198960481556.8
hypothetical proteinPEV8663_02011Not AvailableNegative1989689 - 199025521219.3
putative amino-acid metabolite efflux pumpPEV8663_02012Not AvailableNegative1990331 - 199123031584.2
ketol-acid reductoisomerasePEV8663_02013Not AvailableNegative1991327 - 199234937225.7
leucine-responsive regulatory proteinPEV8663_02014Not AvailablePositive1992502 - 199295717151.7
leucine-responsive regulatory proteinPEV8663_02015Not AvailablePositive1992967 - 199342216740.4
2-aminoethylphosphonate--pyruvate transaminasePEV8663_02016Not AvailablePositive1993494 - 199461840105.9
2-octaprenylphenol hydroxylasePEV8663_02017Not AvailableNegative1994698 - 199589142745.6
hypothetical proteinPEV8663_02018Not AvailableNegative1995964 - 19961436106.83

Displaying genes 2071 – 2080 of 4793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.