Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 26 kda periplasmic immunogenic protein precursor | PEV8663_01969 | Not Available | Positive | 1943964 - 1944653 | 23985.5 |
| hypothetical protein | PEV8663_01970 | Not Available | Negative | 1944625 - 1944720 | 3628.58 |
| methionine gamma-lyase | PEV8663_01971 | Not Available | Negative | 1944747 - 1946039 | 45807.2 |
| hypothetical protein | PEV8663_01972 | Not Available | Negative | 1946195 - 1947199 | 38409.0 |
| hypothetical protein | PEV8663_01973 | Not Available | Positive | 1947306 - 1947872 | 20320.0 |
| glutamyl-trna(gln) amidotransferase subunit c | PEV8663_01974 | Not Available | Positive | 1948013 - 1948300 | 10377.5 |
| glutamyl-trna(gln) amidotransferase subunit a | PEV8663_01975 | Not Available | Positive | 1948300 - 1949787 | 52692.7 |
| hypothetical protein | PEV8663_01976 | Not Available | Positive | 1949833 - 1950531 | 23991.9 |
| n-acetylmuramoyl-l-alanine amidase amid precursor | PEV8663_01977 | Not Available | Positive | 1950544 - 1951236 | 25192.8 |
| helix-turn-helix domain protein | PEV8663_01978 | Not Available | Negative | 1951239 - 1952639 | 51979.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
