Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-pyruvate decarboxylase | PEV8663_00017 | Not Available | Negative | 16276 - 18138 | 66099.1 |
| protoporphyrinogen oxidase | PEV8663_00018 | Not Available | Negative | 18142 - 19926 | 66388.4 |
| hypothetical protein | PEV8663_00019 | Not Available | Negative | 20026 - 21105 | 39946.6 |
| hypothetical protein | PEV8663_00020 | Not Available | Negative | 21130 - 22914 | 64577.9 |
| monomeric sarcosine oxidase | PEV8663_00021 | Not Available | Negative | 22967 - 24169 | 43886.9 |
| m61 glycyl aminopeptidase | PEV8663_00022 | Not Available | Negative | 24216 - 26024 | 66690.6 |
| hypothetical protein | PEV8663_00023 | Not Available | Positive | 26682 - 26864 | 6892.42 |
| hypothetical protein | PEV8663_00024 | Not Available | Negative | 27092 - 27193 | 3582.34 |
| hypothetical protein | PEV8663_00025 | Not Available | Negative | 27350 - 27493 | 5145.99 |
| Trna-asn | Not Available | Not Available | Positive | 28079 - 28153 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
