Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein uup | PEV8663_01577 | Not Available | Negative | 1546415 - 1548232 | 67031.9 |
| hypothetical protein | PEV8663_01578 | Not Available | Negative | 1548330 - 1549070 | 27667.5 |
| smpa / omla family protein | PEV8663_01579 | Not Available | Negative | 1549144 - 1549602 | 16697.0 |
| hypothetical protein | PEV8663_01580 | Not Available | Positive | 1549689 - 1550258 | 20470.2 |
| 50s ribosomal protein l32 | PEV8663_01581 | Not Available | Positive | 1550411 - 1550617 | 7568.71 |
| phosphate acyltransferase | PEV8663_01582 | Not Available | Positive | 1550640 - 1551764 | 39990.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | PEV8663_01583 | Not Available | Positive | 1551761 - 1552732 | 34214.7 |
| integration host factor subunit alpha | PEV8663_01584 | Not Available | Positive | 1552851 - 1553153 | 11098.3 |
| merr family regulatory protein | PEV8663_01585 | Not Available | Positive | 1553164 - 1554132 | 35631.0 |
| Trna-pro | Not Available | Not Available | Positive | 1554218 - 1554294 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
