Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | PEV8663_01467 | Not Available | Negative | 1437169 - 1438326 | 41690.7 |
| tpr repeat-containing protein yfgc precursor | PEV8663_01468 | Not Available | Positive | 1438384 - 1439706 | 47156.1 |
| disulfide bond formation protein d precursor | PEV8663_01469 | Not Available | Positive | 1439726 - 1440505 | 27763.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | PEV8663_01470 | Not Available | Negative | 1440581 - 1441708 | 40042.2 |
| cytoskeletal protein rodz | PEV8663_01471 | Not Available | Negative | 1441806 - 1443458 | 57347.9 |
| 5-aminolevulinate synthase | PEV8663_01472 | Not Available | Negative | 1443583 - 1444806 | 44545.4 |
| succinyl-diaminopimelate desuccinylase | PEV8663_01473 | Not Available | Positive | 1445086 - 1446459 | 49916.9 |
| hypothetical protein | PEV8663_01474 | Not Available | Positive | 1446702 - 1447235 | 19322.3 |
| hypothetical protein | PEV8663_01475 | Not Available | Negative | 1447240 - 1448115 | 33370.9 |
| hypothetical protein | PEV8663_01476 | Not Available | Positive | 1448239 - 1448994 | 28413.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
