Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin 6a synthase | PEV8663_01427 | Not Available | Positive | 1395483 - 1396238 | 27514.1 |
| Tmrna,resume consensus sequence (at 196): tacaattgcaaatgacaa | Not Available | Not Available | Positive | 1396300 - 1396631 | Not Available |
| snoal-like domain protein | PEV8663_01429 | Not Available | Positive | 1396687 - 1397130 | 16496.4 |
| putative chromate transport protein | PEV8663_01430 | Not Available | Positive | 1397170 - 1398438 | 45227.9 |
| stringent starvation protein b | PEV8663_01431 | Not Available | Positive | 1398506 - 1398970 | 17674.3 |
| ribosomal rna small subunit methyltransferase a | PEV8663_01432 | Not Available | Positive | 1399138 - 1399707 | 20445.8 |
| fumarate hydratase class ii | PEV8663_01433 | Not Available | Positive | 1399792 - 1401186 | 49292.1 |
| sulfoxide reductase heme-binding subunit yedz | PEV8663_01434 | Not Available | Positive | 1401320 - 1401913 | 22747.2 |
| hypothetical protein | PEV8663_01435 | Not Available | Positive | 1402124 - 1402345 | 8240.83 |
| fe(3+) ions import atp-binding protein fbpc | PEV8663_01436 | Not Available | Negative | 1402370 - 1403452 | 39821.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
