Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Minor spike protein | PEV8663_04765 | Not Available | Positive | 4862710 - 4863696 | 34449.3 |
| hypothetical protein | PEV8663_00001 | Not Available | Positive | 223 - 960 | 25469.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 372 - 480 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 607 - 3414 | Not Available |
| chromosome segregation protein | PEV8663_00002 | Not Available | Negative | 1503 - 4130 | 94461.4 |
| 16s ribosomal rna (partial) | Not Available | Not Available | Positive | 4174 - 5006 | 18.01 |
| putative metallophosphoesterase yhao | PEV8663_00003 | Not Available | Negative | 4127 - 5260 | 42041.5 |
| hypothetical protein | PEV8663_00004 | Not Available | Negative | 5577 - 6011 | 15978.2 |
| hypothetical protein | PEV8663_00005 | Not Available | Negative | 6011 - 6208 | 6777.79 |
| hypothetical protein | PEV8663_00006 | Not Available | Positive | 6553 - 7638 | 39202.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
