Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine-phosphate decarboxylase | PEV8663_01405 | Not Available | Positive | 1376505 - 1377470 | 34948.8 |
| 5,6-dimethylbenzimidazole synthase | PEV8663_01406 | Not Available | Positive | 1377467 - 1378090 | 23349.8 |
| cobyric acid synthase | PEV8663_01407 | Not Available | Negative | 1378087 - 1379520 | 50500.5 |
| hypothetical protein | PEV8663_01408 | Not Available | Negative | 1379532 - 1379879 | 12321.9 |
| hypothetical protein | PEV8663_01409 | Not Available | Negative | 1379880 - 1380224 | 12122.7 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PEV8663_01410 | Not Available | Negative | 1380224 - 1380832 | 22694.6 |
| hypothetical protein | PEV8663_01412 | Not Available | Positive | 1381398 - 1381772 | 13220.6 |
| putative gtp-binding protein yjia | PEV8663_01413 | Not Available | Positive | 1381765 - 1382799 | 36979.3 |
| aerobic cobaltochelatase subunit cobn | PEV8663_01414 | Not Available | Positive | 1382806 - 1386051 | 116372.0 |
| ferredoxin-nitrite reductase | PEV8663_01415 | Not Available | Positive | 1386048 - 1387205 | 40305.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
