Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PEV8663_01345 | Not Available | Negative | 1324973 - 1325800 | 28714.2 |
| cold shock protein cspv | PEV8663_01346 | Not Available | Negative | 1325776 - 1326303 | 19295.9 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | PEV8663_01347 | Not Available | Negative | 1326467 - 1327072 | 22393.3 |
| enoyl-[acyl-carrier-protein] reductase | PEV8663_01348 | Not Available | Positive | 1327215 - 1328021 | 28723.6 |
| threonine efflux protein | PEV8663_01349 | Not Available | Positive | 1328040 - 1328642 | 21092.5 |
| threonine efflux protein | PEV8663_01350 | Not Available | Positive | 1328643 - 1329254 | 21553.4 |
| xanthine phosphoribosyltransferase | PEV8663_01351 | Not Available | Positive | 1329291 - 1329797 | 18906.7 |
| aspartate aminotransferase | PEV8663_01352 | Not Available | Positive | 1329853 - 1331049 | 43449.3 |
| peptidyl-prolyl cis-trans isomerase d | PEV8663_01353 | Not Available | Positive | 1331105 - 1332955 | 66157.0 |
| anthranilate synthase component 1 | PEV8663_01354 | Not Available | Positive | 1332971 - 1334485 | 55105.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
