Pelagimonas varians strain CECT 8663

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas varians strain CECT 8663 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain exhibits mesophilic growth, with an optimal temperature for proliferation identified at 29°C. The genomic structure of Pelagimonas varians strain CECT 8663 is notable for having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and survival in specific ecological niches. The strain is cataloged under the accession number FXYH00000000.1, which serves as a reference for its genomic data. Understanding the traits of Pelagimonas varians strain CECT 8663 can offer insights into its ecological role, particularly in marine environments where similar aerobic, mesophilic bacteria are often integral to nutrient cycling and organic matter degradation. The reliance on aerobic conditions suggests that this strain may play a significant role in the decomposition of organic materials in oxygen-rich aquatic ecosystems, contributing to the overall health and function of these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas varians
Strainstrain CECT 8663

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagimonas varians strain CECT 8663 genome assembly, contig:

Gene Summary

Adenine Count

1099218 bp

Thymine Count

1095060 bp

Guanine Count

1341998 bp

Cytosine Count

1360831 bp

Genome Length

4897107 bp

Protein-coding Genes

4651 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPEV8663_01345Not AvailableNegative1324973 - 132580028714.2
cold shock protein cspvPEV8663_01346Not AvailableNegative1325776 - 132630319295.9
pyridoxine/pyridoxamine 5'-phosphate oxidasePEV8663_01347Not AvailableNegative1326467 - 132707222393.3
enoyl-[acyl-carrier-protein] reductasePEV8663_01348Not AvailablePositive1327215 - 132802128723.6
threonine efflux proteinPEV8663_01349Not AvailablePositive1328040 - 132864221092.5
threonine efflux proteinPEV8663_01350Not AvailablePositive1328643 - 132925421553.4
xanthine phosphoribosyltransferasePEV8663_01351Not AvailablePositive1329291 - 132979718906.7
aspartate aminotransferasePEV8663_01352Not AvailablePositive1329853 - 133104943449.3
peptidyl-prolyl cis-trans isomerase dPEV8663_01353Not AvailablePositive1331105 - 133295566157.0
anthranilate synthase component 1PEV8663_01354Not AvailablePositive1332971 - 133448555105.6

Displaying genes 1411 – 1420 of 4793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.