Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-2-dehydro-3-deoxyheptonate aldolase | PEV8663_01325 | Not Available | Negative | 1302154 - 1303524 | 49841.1 |
| hth-type transcriptional regulator cdhr | PEV8663_01326 | Not Available | Positive | 1303728 - 1304738 | 37621.1 |
| hypothetical protein | PEV8663_01327 | Not Available | Positive | 1304735 - 1305232 | 19283.1 |
| hypothetical protein | PEV8663_01328 | Not Available | Negative | 1305229 - 1305639 | 15578.7 |
| hypothetical protein | PEV8663_01329 | Not Available | Positive | 1306057 - 1307241 | 39647.5 |
| lipopolysaccharide export system atp-binding protein lptb | PEV8663_01330 | Not Available | Positive | 1307334 - 1308119 | 28442.6 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PEV8663_01331 | Not Available | Positive | 1308116 - 1308943 | 29317.1 |
| high-affinity branched-chain amino acid transport system permease protein livh | PEV8663_01332 | Not Available | Positive | 1309028 - 1310038 | 36632.0 |
| leucine/isoleucine/valine transporter permease subunit | PEV8663_01333 | Not Available | Positive | 1310035 - 1311327 | 45439.1 |
| hth-type transcriptional regulator sinr | PEV8663_01334 | Not Available | Negative | 1311407 - 1312027 | 23365.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
