Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major head protein | PEV8663_03621 | Not Available | Negative | 3668539 - 3668697 | 5981.01 |
| Major head protein | PEV8663_03622 | Not Available | Negative | 3668818 - 3669183 | 13289.9 |
| Hypothetical protein | PEV8663_03623 | Not Available | Negative | 3669195 - 3669470 | 9272.69 |
| Hypothetical protein | PEV8663_03624 | Not Available | Negative | 3669409 - 3669627 | 7275.58 |
| Internal scaffolding protein | PEV8663_04759 | Not Available | Positive | 4859468 - 4859830 | 13843.8 |
| Protein k | PEV8663_04760 | Not Available | Positive | 4859830 - 4860000 | 6392.02 |
| External scaffolding protein | PEV8663_04761 | Not Available | Positive | 4860169 - 4860627 | 16938.3 |
| Dna packaging protein | PEV8663_04762 | Not Available | Positive | 4860627 - 4860743 | 4227.24 |
| Capsid protein | PEV8663_04763 | Not Available | Positive | 4860780 - 4862063 | 48485.4 |
| Major spike protein | PEV8663_04764 | Not Available | Positive | 4862174 - 4862701 | 19048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
