Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PEV8663_01215 | Not Available | Positive | 1202696 - 1202863 | 6678.95 |
| hnh endonuclease | PEV8663_01216 | Not Available | Positive | 1202863 - 1203213 | 12637.9 |
| Trna-arg | Not Available | Not Available | Positive | 1211433 - 1211509 | Not Available |
| signal-transduction histidine kinase senx3 | PEV8663_01228 | Not Available | Negative | 1211566 - 1212948 | 50393.4 |
| mercuric reductase | PEV8663_01229 | Not Available | Negative | 1212955 - 1214373 | 50675.1 |
| snare associated golgi protein | PEV8663_01230 | Not Available | Negative | 1214376 - 1215149 | 27219.5 |
| 50s ribosomal protein l34 | PEV8663_01231 | Not Available | Positive | 1215401 - 1215535 | 5153.46 |
| ribonuclease p | PEV8663_01232 | Not Available | Positive | 1215553 - 1215951 | 14611.9 |
| putative membrane protein insertion efficiency factor | PEV8663_01233 | Not Available | Positive | 1215948 - 1216178 | 8464.35 |
| trna 2-thiocytidine biosynthesis protein ttca | PEV8663_01234 | Not Available | Positive | 1216258 - 1217106 | 32146.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
