Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soluble lytic murein transglycosylase precursor | PEV8663_01075 | Not Available | Negative | 1063584 - 1065557 | 72169.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PEV8663_01076 | Not Available | Positive | 1065699 - 1066571 | 30183.4 |
| peptidase m16 inactive domain protein | PEV8663_01077 | Not Available | Negative | 1066648 - 1067946 | 46711.2 |
| protease 3 precursor | PEV8663_01078 | Not Available | Negative | 1067943 - 1069310 | 50493.7 |
| hypothetical protein | PEV8663_01079 | Not Available | Negative | 1069394 - 1069918 | 18809.2 |
| lipoprotein signal peptidase | PEV8663_01080 | Not Available | Negative | 1069974 - 1070480 | 18472.0 |
| bifunctional purine biosynthesis protein purh | PEV8663_01081 | Not Available | Negative | 1070671 - 1072257 | 55924.8 |
| heparinase ii/iii-like protein | PEV8663_01082 | Not Available | Negative | 1072278 - 1074113 | 67116.2 |
| ribosomal rna small subunit methyltransferase b | PEV8663_01083 | Not Available | Negative | 1074154 - 1075410 | 44612.6 |
| hypothetical protein | PEV8663_01084 | Not Available | Positive | 1075497 - 1075679 | 6501.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
