Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PEV8663_01045 | Not Available | Negative | 1033689 - 1033871 | 6730.22 |
| lon protease 2 | PEV8663_01046 | Not Available | Negative | 1033868 - 1034509 | 24199.2 |
| thioredoxin-1 | PEV8663_01047 | Not Available | Negative | 1034537 - 1035445 | 31747.1 |
| exodeoxyribonuclease iii | PEV8663_01048 | Not Available | Negative | 1035541 - 1036329 | 29759.2 |
| alkyl hydroperoxide reductase subunit c | PEV8663_01049 | Not Available | Negative | 1036513 - 1037166 | 23594.3 |
| 3-succinoylsemialdehyde-pyridine dehydrogenase | PEV8663_01050 | Not Available | Positive | 1037334 - 1038773 | 51194.9 |
| ribosomal large subunit pseudouridine synthase a | PEV8663_01051 | Not Available | Negative | 1038860 - 1039513 | 24643.6 |
| eama-like transporter family protein | PEV8663_01052 | Not Available | Negative | 1039531 - 1040415 | 32035.2 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PEV8663_01053 | Not Available | Negative | 1040585 - 1043038 | 89813.8 |
| hth-type transcriptional regulator cdhr | PEV8663_01054 | Not Available | Negative | 1043117 - 1044115 | 36804.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
