Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aerotaxis receptor | PEV8663_01025 | Not Available | Negative | 1016271 - 1017515 | 46396.5 |
| inner membrane abc transporter permease protein ydcv | PEV8663_01026 | Not Available | Negative | 1017644 - 1018498 | 31232.0 |
| spermidine/putrescine transport system permease protein potb | PEV8663_01027 | Not Available | Negative | 1018504 - 1019775 | 46647.0 |
| hypothetical protein | PEV8663_01028 | Not Available | Negative | 1019772 - 1020062 | 10780.8 |
| bacterial extracellular solute-binding protein | PEV8663_01029 | Not Available | Negative | 1020157 - 1021263 | 40036.8 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PEV8663_01030 | Not Available | Negative | 1021377 - 1022660 | 47699.5 |
| l,d-transpeptidase catalytic domain | PEV8663_01031 | Not Available | Negative | 1022681 - 1023220 | 20267.4 |
| gtp cyclohydrolase-2 | PEV8663_01032 | Not Available | Negative | 1023230 - 1024318 | 38948.3 |
| alkaline phosphatase synthesis transcriptional regulatory protein sphr | PEV8663_01033 | Not Available | Positive | 1024463 - 1025149 | 25831.0 |
| hypothetical protein | PEV8663_01034 | Not Available | Negative | 1025316 - 1025669 | 13127.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
