Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagimonas |
| Species | Pelagimonas varians |
| Strain | strain CECT 8663 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1099218 bp
Thymine Count
1095060 bp
Guanine Count
1341998 bp
Cytosine Count
1360831 bp
Genome Length
4897107 bp
Protein-coding Genes
4651 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase, subunit b | PEV8663_01015 | Not Available | Negative | 1007613 - 1007897 | 10677.4 |
| 1,2-phenylacetyl-coa epoxidase, subunit a | PEV8663_01016 | Not Available | Negative | 1007993 - 1008976 | 37371.2 |
| nad dependent epimerase/dehydratase family protein | PEV8663_01017 | Not Available | Positive | 1009010 - 1009942 | 33557.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | PEV8663_01018 | Not Available | Negative | 1009944 - 1011869 | 68725.5 |
| farnesyl diphosphate synthase | PEV8663_01019 | Not Available | Negative | 1011887 - 1012759 | 29888.7 |
| exodeoxyribonuclease 7 small subunit | PEV8663_01020 | Not Available | Negative | 1012766 - 1013011 | 8603.11 |
| histone deacetylase-like amidohydrolase | PEV8663_01021 | Not Available | Negative | 1013008 - 1013934 | 33320.5 |
| transcriptional regulatory protein ompr | PEV8663_01022 | Not Available | Negative | 1013973 - 1014674 | 26103.5 |
| transcriptional regulator slya | PEV8663_01023 | Not Available | Negative | 1014671 - 1015174 | 18865.5 |
| branched-chain-amino-acid aminotransferase | PEV8663_01024 | Not Available | Positive | 1015331 - 1016203 | 32090.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
