Octadecabacter ascidiaceicola strain CECT 8868

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Octadecabacter

Description

Octadecabacter ascidiaceicola strain CECT 8868 is a bacterial strain characterized by a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that allow the organism to thrive in specific environments. The strain's genome is cataloged under the accession number FXYD00000000.1, providing a reference for researchers seeking to study its genetic composition and functional capabilities. The existence of a single replicon suggests a simplified genetic arrangement, which may confer advantages in terms of replication efficiency and stability in its ecological niche. Biologically, Octadecabacter ascidiaceicola is known to be associated with ascidians, marine invertebrates that play a significant role in marine ecosystems. The interaction between this bacterium and its host could be crucial for understanding the dynamics of microbial communities within marine environments. Such associations can influence nutrient cycling, symbiotic relationships, and even the health of the host organisms. In summary, Octadecabacter ascidiaceicola strain CECT 8868, with its single replicon and association with marine ascidians, exemplifies the intricate relationships between microorganisms and their environments, highlighting the importance of studying such organisms for insights into marine microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOctadecabacter
SpeciesOctadecabacter ascidiaceicola
Strainstrain CECT 8868

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Octadecabacter ascidiaceicola strain CECT 8868 genome assembly,

Gene Summary

Adenine Count

723691 bp

Thymine Count

733774 bp

Guanine Count

898310 bp

Cytosine Count

877285 bp

Genome Length

3233060 bp

Protein-coding Genes

3261 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide export system permease protein lptgOCA8868_00557Not AvailablePositive569900 - 57099439726.6
lps-assembly protein lptd precursorOCA8868_00558Not AvailablePositive570994 - 57309076892.6
chaperone sura precursorOCA8868_00559Not AvailablePositive573140 - 57434543392.8
4-hydroxythreonine-4-phosphate dehydrogenaseOCA8868_00560Not AvailablePositive574345 - 57530433020.9
ribosomal rna small subunit methyltransferase aOCA8868_00561Not AvailablePositive575301 - 57614030600.0
hypothetical proteinOCA8868_00562Not AvailableNegative576271 - 57682520791.8
release factor glutamine methyltransferaseOCA8868_00563Not AvailableNegative577022 - 57784630244.9
peptide chain release factor 1OCA8868_00564Not AvailableNegative577843 - 57889838869.0
hypothetical proteinOCA8868_00565Not AvailableNegative578895 - 57935016449.8
guanidinobutyraseOCA8868_00566Not AvailableNegative579375 - 58032234156.0

Displaying genes 601 – 610 of 3332 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.