Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Octadecabacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Octadecabacter |
| Species | Octadecabacter ascidiaceicola |
| Strain | strain CECT 8868 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723691 bp
Thymine Count
733774 bp
Guanine Count
898310 bp
Cytosine Count
877285 bp
Genome Length
3233060 bp
Protein-coding Genes
3261 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain protein | OCA8868_03267 | Not Available | Positive | 3163555 - 3164715 | 43431.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | OCA8868_03268 | Not Available | Positive | 3165627 - 3166196 | 20958.6 |
| dtdp-glucose 4,6-dehydratase 2 | OCA8868_03269 | Not Available | Positive | 3166193 - 3167233 | 38380.2 |
| dtdp-4-dehydrorhamnose reductase | OCA8868_03270 | Not Available | Positive | 3167230 - 3168081 | 29984.2 |
| glucose-1-phosphate thymidylyltransferase 1 | OCA8868_03271 | Not Available | Positive | 3168078 - 3168950 | 31832.2 |
| integrase core domain protein | OCA8868_03272 | Not Available | Positive | 3169095 - 3170102 | 39604.6 |
| integrase core domain protein | OCA8868_03273 | Not Available | Negative | 3170371 - 3170820 | 17409.3 |
| transposase | OCA8868_03274 | Not Available | Negative | 3170771 - 3171004 | 8650.13 |
| transposase | OCA8868_03275 | Not Available | Positive | 3171166 - 3171474 | 11444.8 |
| integrase core domain protein | OCA8868_03276 | Not Available | Positive | 3171468 - 3172337 | 34057.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
