Octadecabacter ascidiaceicola strain CECT 8868

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Octadecabacter

Description

Octadecabacter ascidiaceicola strain CECT 8868 is a bacterial strain characterized by a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that allow the organism to thrive in specific environments. The strain's genome is cataloged under the accession number FXYD00000000.1, providing a reference for researchers seeking to study its genetic composition and functional capabilities. The existence of a single replicon suggests a simplified genetic arrangement, which may confer advantages in terms of replication efficiency and stability in its ecological niche. Biologically, Octadecabacter ascidiaceicola is known to be associated with ascidians, marine invertebrates that play a significant role in marine ecosystems. The interaction between this bacterium and its host could be crucial for understanding the dynamics of microbial communities within marine environments. Such associations can influence nutrient cycling, symbiotic relationships, and even the health of the host organisms. In summary, Octadecabacter ascidiaceicola strain CECT 8868, with its single replicon and association with marine ascidians, exemplifies the intricate relationships between microorganisms and their environments, highlighting the importance of studying such organisms for insights into marine microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOctadecabacter
SpeciesOctadecabacter ascidiaceicola
Strainstrain CECT 8868

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Octadecabacter ascidiaceicola strain CECT 8868 genome assembly,

Gene Summary

Adenine Count

723691 bp

Thymine Count

733774 bp

Guanine Count

898310 bp

Cytosine Count

877285 bp

Genome Length

3233060 bp

Protein-coding Genes

3261 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursorOCA8868_00239Not AvailableNegative237235 - 23842540019.6
leucine/isoleucine/valine transporter permease subunitOCA8868_00240Not AvailableNegative238422 - 23952240462.9
high-affinity branched-chain amino acid transport system permease protein livhOCA8868_00241Not AvailableNegative239522 - 24047534299.3
high-affinity branched-chain amino acid transport atp-binding protein livfOCA8868_00242Not AvailableNegative240477 - 24119325387.7
lipopolysaccharide export system atp-binding protein lptbOCA8868_00243Not AvailableNegative241190 - 24196928158.1
catalase-peroxidaseOCA8868_00244Not AvailableNegative242182 - 24436577981.8
hydrogen peroxide-inducible genes activatorOCA8868_00245Not AvailablePositive244461 - 24535733112.5
taurine--pyruvate aminotransferaseOCA8868_00246Not AvailableNegative245354 - 24675150001.9
putrescine-binding periplasmic protein precursorOCA8868_00247Not AvailablePositive246948 - 24803639850.3
spermidine/putrescine import atp-binding protein potaOCA8868_00248Not AvailablePositive248096 - 24922941434.8

Displaying genes 281 – 290 of 3332 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.