Octadecabacter ascidiaceicola strain CECT 8868

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Octadecabacter

Description

Octadecabacter ascidiaceicola strain CECT 8868 is a bacterial strain characterized by a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that allow the organism to thrive in specific environments. The strain's genome is cataloged under the accession number FXYD00000000.1, providing a reference for researchers seeking to study its genetic composition and functional capabilities. The existence of a single replicon suggests a simplified genetic arrangement, which may confer advantages in terms of replication efficiency and stability in its ecological niche. Biologically, Octadecabacter ascidiaceicola is known to be associated with ascidians, marine invertebrates that play a significant role in marine ecosystems. The interaction between this bacterium and its host could be crucial for understanding the dynamics of microbial communities within marine environments. Such associations can influence nutrient cycling, symbiotic relationships, and even the health of the host organisms. In summary, Octadecabacter ascidiaceicola strain CECT 8868, with its single replicon and association with marine ascidians, exemplifies the intricate relationships between microorganisms and their environments, highlighting the importance of studying such organisms for insights into marine microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOctadecabacter
SpeciesOctadecabacter ascidiaceicola
Strainstrain CECT 8868

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Octadecabacter ascidiaceicola strain CECT 8868 genome assembly,

Gene Summary

Adenine Count

723691 bp

Thymine Count

733774 bp

Guanine Count

898310 bp

Cytosine Count

877285 bp

Genome Length

3233060 bp

Protein-coding Genes

3261 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional repressor puurOCA8868_02774Not AvailableNegative2693844 - 269447323144.6
hth-type transcriptional regulator cdhrOCA8868_02775Not AvailablePositive2694601 - 269560536740.3
sarcosine oxidase, gamma subunit familyOCA8868_02776Not AvailableNegative2695602 - 269616520187.3
aminomethyltransferaseOCA8868_02777Not AvailableNegative2696158 - 2699094105418.0
sarcosine oxidase, delta subunit familyOCA8868_02778Not AvailableNegative2699091 - 269937811074.9
sarcosine oxidase subunit betaOCA8868_02779Not AvailableNegative2699378 - 270062845600.6
glycine betaine/carnitine transport binding protein gbuc precursorOCA8868_02780Not AvailablePositive2700908 - 270184934489.2
glycine betaine transport atp-binding protein opuaaOCA8868_02781Not AvailablePositive2701925 - 270294437909.9
glycine betaine transport system permease protein opuabOCA8868_02782Not AvailablePositive2702944 - 270515781095.7
hypothetical proteinOCA8868_02783Not AvailablePositive2705417 - 27055243976.57

Displaying genes 2771 – 2780 of 3332 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.