Octadecabacter ascidiaceicola strain CECT 8868

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Octadecabacter

Description

Octadecabacter ascidiaceicola strain CECT 8868 is a bacterial strain characterized by a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that allow the organism to thrive in specific environments. The strain's genome is cataloged under the accession number FXYD00000000.1, providing a reference for researchers seeking to study its genetic composition and functional capabilities. The existence of a single replicon suggests a simplified genetic arrangement, which may confer advantages in terms of replication efficiency and stability in its ecological niche. Biologically, Octadecabacter ascidiaceicola is known to be associated with ascidians, marine invertebrates that play a significant role in marine ecosystems. The interaction between this bacterium and its host could be crucial for understanding the dynamics of microbial communities within marine environments. Such associations can influence nutrient cycling, symbiotic relationships, and even the health of the host organisms. In summary, Octadecabacter ascidiaceicola strain CECT 8868, with its single replicon and association with marine ascidians, exemplifies the intricate relationships between microorganisms and their environments, highlighting the importance of studying such organisms for insights into marine microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOctadecabacter
SpeciesOctadecabacter ascidiaceicola
Strainstrain CECT 8868

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Octadecabacter ascidiaceicola strain CECT 8868 genome assembly,

Gene Summary

Adenine Count

723691 bp

Thymine Count

733774 bp

Guanine Count

898310 bp

Cytosine Count

877285 bp

Genome Length

3233060 bp

Protein-coding Genes

3261 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease rOCA8868_02277Not AvailableNegative2205623 - 220786681558.2
succinyl-diaminopimelate desuccinylaseOCA8868_02278Not AvailableNegative2207996 - 220913840322.7
hypothetical proteinOCA8868_02279Not AvailablePositive2209459 - 221104856401.6
hypothetical proteinOCA8868_02280Not AvailablePositive2211055 - 221214639446.9
hypothetical proteinOCA8868_02281Not AvailableNegative2212143 - 221249912978.3
hypothetical proteinOCA8868_02282Not AvailableNegative2212496 - 221278010481.8
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseOCA8868_02283Not AvailableNegative2212780 - 221360729725.3
phenylserine dehydrataseOCA8868_02284Not AvailableNegative2213682 - 221459331422.5
putative lysine decarboxylaseOCA8868_02285Not AvailablePositive2214669 - 221550831027.0
hypothetical proteinOCA8868_02286Not AvailableNegative2215492 - 221592015944.3

Displaying genes 2281 – 2290 of 3332 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.