Octadecabacter ascidiaceicola strain CECT 8868

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Octadecabacter

Description

Octadecabacter ascidiaceicola strain CECT 8868 is a bacterial strain characterized by a single replicon, which indicates a streamlined genomic structure. This trait can often be associated with certain ecological adaptations that allow the organism to thrive in specific environments. The strain's genome is cataloged under the accession number FXYD00000000.1, providing a reference for researchers seeking to study its genetic composition and functional capabilities. The existence of a single replicon suggests a simplified genetic arrangement, which may confer advantages in terms of replication efficiency and stability in its ecological niche. Biologically, Octadecabacter ascidiaceicola is known to be associated with ascidians, marine invertebrates that play a significant role in marine ecosystems. The interaction between this bacterium and its host could be crucial for understanding the dynamics of microbial communities within marine environments. Such associations can influence nutrient cycling, symbiotic relationships, and even the health of the host organisms. In summary, Octadecabacter ascidiaceicola strain CECT 8868, with its single replicon and association with marine ascidians, exemplifies the intricate relationships between microorganisms and their environments, highlighting the importance of studying such organisms for insights into marine microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOctadecabacter
SpeciesOctadecabacter ascidiaceicola
Strainstrain CECT 8868

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Octadecabacter ascidiaceicola strain CECT 8868 genome assembly,

Gene Summary

Adenine Count

723691 bp

Thymine Count

733774 bp

Guanine Count

898310 bp

Cytosine Count

877285 bp

Genome Length

3233060 bp

Protein-coding Genes

3261 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nyn domain proteinOCA8868_02146Not AvailablePositive2086370 - 208694221945.3
cytochrome cOCA8868_02147Not AvailableNegative2086984 - 208745116583.5
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseOCA8868_02148Not AvailablePositive2087593 - 208854634337.3
mg-protoporphyrin ix methyl transferaseOCA8868_02149Not AvailablePositive2088543 - 208913921406.3
ribonuclease hiOCA8868_02150Not AvailablePositive2089132 - 208958116440.3
methionyl-trna formyltransferaseOCA8868_02151Not AvailableNegative2089653 - 209055831995.1
peptide deformylaseOCA8868_02152Not AvailableNegative2090572 - 209106618326.2
peptide deformylaseOCA8868_02153Not AvailableNegative2091094 - 209163019935.2
cystathionine beta-lyase patbOCA8868_02154Not AvailablePositive2091729 - 209289842784.6
hypothetical proteinOCA8868_02155Not AvailableNegative2092900 - 209324712666.1

Displaying genes 2151 – 2160 of 3332 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.