Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Octadecabacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Octadecabacter |
| Species | Octadecabacter ascidiaceicola |
| Strain | strain CECT 8868 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723691 bp
Thymine Count
733774 bp
Guanine Count
898310 bp
Cytosine Count
877285 bp
Genome Length
3233060 bp
Protein-coding Genes
3261 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nyn domain protein | OCA8868_02146 | Not Available | Positive | 2086370 - 2086942 | 21945.3 |
| cytochrome c | OCA8868_02147 | Not Available | Negative | 2086984 - 2087451 | 16583.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | OCA8868_02148 | Not Available | Positive | 2087593 - 2088546 | 34337.3 |
| mg-protoporphyrin ix methyl transferase | OCA8868_02149 | Not Available | Positive | 2088543 - 2089139 | 21406.3 |
| ribonuclease hi | OCA8868_02150 | Not Available | Positive | 2089132 - 2089581 | 16440.3 |
| methionyl-trna formyltransferase | OCA8868_02151 | Not Available | Negative | 2089653 - 2090558 | 31995.1 |
| peptide deformylase | OCA8868_02152 | Not Available | Negative | 2090572 - 2091066 | 18326.2 |
| peptide deformylase | OCA8868_02153 | Not Available | Negative | 2091094 - 2091630 | 19935.2 |
| cystathionine beta-lyase patb | OCA8868_02154 | Not Available | Positive | 2091729 - 2092898 | 42784.6 |
| hypothetical protein | OCA8868_02155 | Not Available | Negative | 2092900 - 2093247 | 12666.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
