Sphingobacterium psychroaquaticum strain DSM 22418

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium psychroaquaticum strain DSM 22418 is a Gram-negative bacterium characterized by its rod shape and aerobic growth requirements. This strain is notable for having a single replicon, which is a feature that can influence its genetic stability and replication process. The strain is cataloged with the accession number FXAU00000000.1, providing a reference for further research and study. Sphingobacterium psychroaquaticum is part of the Sphingobacterium genus, which consists of bacteria that are often associated with various environmental habitats, particularly in aquatic settings. The psychroaquaticum designation indicates its capability to thrive in cold environments, suggesting potential ecological roles in polar or deep-sea ecosystems. The ability to grow aerobically points to its metabolic pathways that rely on oxygen, which may enable it to play a role in biogeochemical cycles in its natural habitat. The ecological significance of this strain can be further explored in contexts such as nutrient cycling and interactions with other microorganisms. Understanding Sphingobacterium psychroaquaticum's traits can provide insights into its potential applications in biotechnology or environmental management, particularly in cold aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium psychroaquaticum
Strainstrain DSM 22418

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium psychroaquaticum strain DSM 22418
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium psychroaquaticum strain DSM 22418 genome

Gene Summary

Adenine Count

1312608 bp

Thymine Count

1321682 bp

Guanine Count

948451 bp

Cytosine Count

918039 bp

Genome Length

4506111 bp

Protein-coding Genes

3765 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05660862_0412Not AvailableNegative460800 - 4609977220.09
s-adenosylmethionine:trna ribosyltransferase-isomeraseSAMN05660862_0413Not AvailableNegative461124 - 46217339961.0
putative abc transport system permease proteinSAMN05660862_0414Not AvailablePositive462415 - 46367746182.6
aspartate aminotransferaseSAMN05660862_0415Not AvailableNegative463809 - 46501444021.5
solute carrier family 10 (sodium/bile acid cotransporter), member 7SAMN05660862_0416Not AvailablePositive465271 - 46623636326.4
acyl-coa dehydrogenaseSAMN05660862_0417Not AvailablePositive466586 - 46807655317.7
outer membrane protein beta-barrel domain-containing proteinSAMN05660862_0418Not AvailableNegative468183 - 46875521259.6
kdo2-lipid iv(a) lauroyltransferaseSAMN05660862_0419Not AvailableNegative468827 - 46959429837.4
rna polymerase sigma-70 factor, ecf subfamilySAMN05660862_0420Not AvailablePositive469899 - 47043220984.3
fecr family proteinSAMN05660862_0421Not AvailablePositive470429 - 47140037237.7

Displaying genes 361 – 370 of 3821 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.