Sphingobacterium psychroaquaticum strain DSM 22418

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium psychroaquaticum strain DSM 22418 is a Gram-negative bacterium characterized by its rod shape and aerobic growth requirements. This strain is notable for having a single replicon, which is a feature that can influence its genetic stability and replication process. The strain is cataloged with the accession number FXAU00000000.1, providing a reference for further research and study. Sphingobacterium psychroaquaticum is part of the Sphingobacterium genus, which consists of bacteria that are often associated with various environmental habitats, particularly in aquatic settings. The psychroaquaticum designation indicates its capability to thrive in cold environments, suggesting potential ecological roles in polar or deep-sea ecosystems. The ability to grow aerobically points to its metabolic pathways that rely on oxygen, which may enable it to play a role in biogeochemical cycles in its natural habitat. The ecological significance of this strain can be further explored in contexts such as nutrient cycling and interactions with other microorganisms. Understanding Sphingobacterium psychroaquaticum's traits can provide insights into its potential applications in biotechnology or environmental management, particularly in cold aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium psychroaquaticum
Strainstrain DSM 22418

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium psychroaquaticum strain DSM 22418
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium psychroaquaticum strain DSM 22418 genome

Gene Summary

Adenine Count

1312608 bp

Thymine Count

1321682 bp

Guanine Count

948451 bp

Cytosine Count

918039 bp

Genome Length

4506111 bp

Protein-coding Genes

3765 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseSAMN05660862_2074Not AvailablePositive2396094 - 239675025262.0
nadh-quinone oxidoreductase subunit cSAMN05660862_2075Not AvailablePositive2396758 - 239724618749.3
nadh-quinone oxidoreductase subunit dSAMN05660862_2076Not AvailablePositive2397253 - 239844345072.6
dihydroorotaseSAMN05660862_2077Not AvailablePositive2398628 - 239996548997.4
muramoyltetrapeptide carboxypeptidaseSAMN05660862_2078Not AvailablePositive2399970 - 240102538407.4
zinc carboxypeptidaseSAMN05660862_2079Not AvailablePositive2401034 - 240252756615.6
peptidase s46SAMN05660862_2080Not AvailableNegative2402567 - 240473581469.9
lysr family transcriptional regulator, hydrogen peroxide-inducible genes activatorSAMN05660862_2081Not AvailablePositive2404850 - 240579135665.6
chloride channel protein, cic familySAMN05660862_2082Not AvailablePositive2405853 - 240759564190.1
riboflavin synthase alpha chainSAMN05660862_2083Not AvailableNegative2407641 - 240823121682.9

Displaying genes 2011 – 2020 of 3821 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.