Sphingobacterium psychroaquaticum strain DSM 22418

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium psychroaquaticum strain DSM 22418 is a Gram-negative bacterium characterized by its rod shape and aerobic growth requirements. This strain is notable for having a single replicon, which is a feature that can influence its genetic stability and replication process. The strain is cataloged with the accession number FXAU00000000.1, providing a reference for further research and study. Sphingobacterium psychroaquaticum is part of the Sphingobacterium genus, which consists of bacteria that are often associated with various environmental habitats, particularly in aquatic settings. The psychroaquaticum designation indicates its capability to thrive in cold environments, suggesting potential ecological roles in polar or deep-sea ecosystems. The ability to grow aerobically points to its metabolic pathways that rely on oxygen, which may enable it to play a role in biogeochemical cycles in its natural habitat. The ecological significance of this strain can be further explored in contexts such as nutrient cycling and interactions with other microorganisms. Understanding Sphingobacterium psychroaquaticum's traits can provide insights into its potential applications in biotechnology or environmental management, particularly in cold aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium psychroaquaticum
Strainstrain DSM 22418

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium psychroaquaticum strain DSM 22418
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium psychroaquaticum strain DSM 22418 genome

Gene Summary

Adenine Count

1312608 bp

Thymine Count

1321682 bp

Guanine Count

948451 bp

Cytosine Count

918039 bp

Genome Length

4506111 bp

Protein-coding Genes

3765 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeatSAMN05660862_1360Not AvailablePositive1571504 - 1574161101258.0
phosphoesterase recj domain-containing proteinSAMN05660862_1361Not AvailablePositive1574250 - 157526037472.6
fkbp-type peptidyl-prolyl cis-trans isomeraseSAMN05660862_1362Not AvailablePositive1575282 - 157626535333.5
tatd dnase family proteinSAMN05660862_1363Not AvailablePositive1576382 - 157716429524.5
l-asparaginaseSAMN05660862_1364Not AvailablePositive1577174 - 157819638165.8
methyltransferase domain-containing proteinSAMN05660862_1365Not AvailableNegative1578193 - 157890627440.5
nicotinate phosphoribosyltransferaseSAMN05660862_1366Not AvailableNegative1578906 - 158007845107.0
hypothetical proteinSAMN05660862_1367Not AvailableNegative1580259 - 158156949280.2
seryl-trna synthetaseSAMN05660862_1368Not AvailableNegative1581787 - 158305847403.7
16s rrna (cytidine1402-2'-o)-methyltransferaseSAMN05660862_1369Not AvailablePositive1583492 - 158416025152.6

Displaying genes 1301 – 1310 of 3821 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.