Sphingobacterium psychroaquaticum strain DSM 22418

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium psychroaquaticum strain DSM 22418 is a Gram-negative, aerobic rod-shaped bacterium that exhibits notable adaptations to cold environments. This strain is characterized by its psychrophilic nature, which enables it to thrive at low temperatures, a trait that may be advantageous in its native habitats, typically associated with aquatic environments. The Gram-negative cell wall structure of Sphingobacterium psychroaquaticum contributes to its ability to withstand various osmotic pressures, which is likely important for survival in fluctuating aquatic ecosystems. Its aerobic metabolism suggests that it relies on oxygen for energy production, indicating a potential role in the biogeochemical cycling of nutrients in oxygen-rich aquatic systems. The ecological significance of this bacterium may extend to its participation in the degradation of organic materials in cold aquatic settings, where it could play a role in the breakdown of complex compounds, thereby contributing to nutrient availability in its environment. Furthermore, the presence of Sphingobacterium psychroaquaticum in these ecosystems could indicate the resilience of microbial communities in extreme conditions, highlighting the adaptability of life in response to environmental stressors.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium psychroaquaticum
Strainstrain DSM 22418

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium psychroaquaticum strain DSM 22418
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium psychroaquaticum strain DSM 22418


Gene Summary

Adenine Count

1312608 bp

Thymine Count

1321682 bp

Guanine Count

948451 bp

Cytosine Count

918039 bp

Genome Length

4506111 bp

Protein-coding Genes

3765 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s ribosomal rna . bacterial lsuNot AvailableNot Available+1 - 18818.01
5s ribosomal rna . bacterial tsuNot AvailableNot Available+357 - 46818.01
hypothetical proteinSAMN05660862_0053Not Available-388 - 180654159.5
hypothetical proteinSAMN05660862_0054Not Available+2026 - 365161924.8
3-dehydroquinate dehydrataseSAMN05660862_0055Not Available+3728 - 414415342.3
mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance proteinSAMN05660862_0056Not Available-4240 - 544243424.1
prolipoprotein diacylglyceryl transferaseSAMN05660862_0057Not Available-5532 - 635631487.2
putative aminopeptidase frvxSAMN05660862_0058Not Available+6463 - 758141757.0
protein of unknown functionSAMN05660862_0059Not Available+7616 - 795712491.7
predicted amidohydrolaseSAMN05660862_0060Not Available+8002 - 959161238.3

Displaying genes 1 – 10 of 3821 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites