Cedecea sp. NFIX57

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Cedecea

Description

Cedecea sp. NFIX57 is a Gram-negative bacterium characterized by a single replicon. This taxon is represented in the genomic database under the accession number FXAS00000000.1. Cedecea species are known for their environmental versatility and are often isolated from various sources, including clinical settings, although specific ecological or environmental niches for NFIX57 are not detailed here. The classification of Cedecea sp. NFIX57 as Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with antibiotics and its overall pathogenic potential. The presence of only one replicon suggests a streamlined genomic organization, which may facilitate efficient replication and adaptability within its ecological niche. Understanding the traits of Cedecea sp. NFIX57 contributes to the broader knowledge of the Cedecea genus, which can play roles in both environmental processes and human health. The ecological insights gleaned from studying such organisms can inform on their potential uses in biotechnology or their implications in infectious disease contexts. Further research on Cedecea sp. NFIX57 may reveal its specific ecological roles, interactions with other microorganisms, and responses to environmental changes, thereby enhancing our understanding of microbial diversity and dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCedecea
SpeciesCedecea sp. NFIX57
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cedecea sp. NFIX57
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cedecea sp. NFIX57 genome assembly, contig: Ga0059081_1142, whole

Gene Summary

Adenine Count

1217248 bp

Thymine Count

1220406 bp

Guanine Count

1457610 bp

Cytosine Count

1458213 bp

Genome Length

5353919 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

261 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-(apurinic or apyrimidinic site) lyase /endonuclease iiiSAMN03159353_101781Not AvailablePositive3306230 - 330686523366.4
proton-dependent oligopeptide transporter, pot familySAMN03159353_101782Not AvailablePositive3307472 - 330897754296.9
glutathione s-transferaseSAMN03159353_101783Not AvailablePositive3309087 - 330968922351.1
pyridoxal kinaseSAMN03159353_101784Not AvailableNegative3309737 - 331059731201.7
tyrosyl-trna synthetaseSAMN03159353_101785Not AvailableNegative3310676 - 331195047366.2
pyridoxamine 5'-phosphate oxidaseSAMN03159353_101786Not AvailableNegative3312090 - 331274625441.5
membrane-bound inhibitor of c-type lysozymeSAMN03159353_101787Not AvailableNegative3312804 - 331312712098.6
anhydro-n-acetylmuramic acid kinaseSAMN03159353_101788Not AvailableNegative3313219 - 331434340113.4
outer membrane lipoprotein slybSAMN03159353_101789Not AvailablePositive3314636 - 331510015134.0
amino acid abc transporter substrate-binding protein, paat familySAMN03159353_101790Not AvailableNegative3315145 - 331603831674.8

Displaying genes 3321 – 3330 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.