Cedecea sp. NFIX57

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Cedecea

Description

Cedecea sp. NFIX57 is a Gram-negative bacterium characterized by a single replicon. This taxon is represented in the genomic database under the accession number FXAS00000000.1. Cedecea species are known for their environmental versatility and are often isolated from various sources, including clinical settings, although specific ecological or environmental niches for NFIX57 are not detailed here. The classification of Cedecea sp. NFIX57 as Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with antibiotics and its overall pathogenic potential. The presence of only one replicon suggests a streamlined genomic organization, which may facilitate efficient replication and adaptability within its ecological niche. Understanding the traits of Cedecea sp. NFIX57 contributes to the broader knowledge of the Cedecea genus, which can play roles in both environmental processes and human health. The ecological insights gleaned from studying such organisms can inform on their potential uses in biotechnology or their implications in infectious disease contexts. Further research on Cedecea sp. NFIX57 may reveal its specific ecological roles, interactions with other microorganisms, and responses to environmental changes, thereby enhancing our understanding of microbial diversity and dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCedecea
SpeciesCedecea sp. NFIX57
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Cedecea sp. NFIX57
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cedecea sp. NFIX57 genome assembly, contig: Ga0059081_1142, whole

Gene Summary

Adenine Count

1217248 bp

Thymine Count

1220406 bp

Guanine Count

1457610 bp

Cytosine Count

1458213 bp

Genome Length

5353919 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

261 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN03159353_100568Not AvailableNegative1141340 - 114236237350.2
thiaminase (transcriptional activator tena)SAMN03159353_100570Not AvailablePositive1142687 - 114336725081.9
putative hydroxymethylpyrimidine transport system atp-binding proteinSAMN03159353_100571Not AvailablePositive1143364 - 114410426352.0
putative hydroxymethylpyrimidine transport system permease proteinSAMN03159353_100572Not AvailablePositive1144101 - 114487127937.2
putative hydroxymethylpyrimidine transport system substrate-binding proteinSAMN03159353_100573Not AvailablePositive1144897 - 114582934170.3
gtpase, g3e familySAMN03159353_100574Not AvailableNegative1145874 - 114709445663.1
methyl-accepting chemotaxis protein-2, aspartate sensor receptorSAMN03159353_100575Not AvailableNegative1147236 - 114878055852.8
lysr family transcriptional regulator, cys regulon transcriptional activatorSAMN03159353_100576Not AvailableNegative1149166 - 115011035494.7
lysr family transcriptional regulator, nitrogen assimilation regulatory proteinSAMN03159353_100577Not AvailableNegative1150217 - 115113432778.1
thiol-disulfide isomerase or thioredoxinSAMN03159353_100578Not AvailableNegative1151384 - 115188718670.6

Displaying genes 1301 – 1310 of 5248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.