Arenibacter troitsensis strain DSM 19835

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Arenibacter

Description

Arenibacter troitsensis strain DSM 19835 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been cataloged with a single replicon, indicating a streamlined genomic structure. The genomic data for this strain is accessible under the accession number FXAO00000000.1. As a member of the genus Arenibacter, this organism is likely to inhabit marine environments, which is common among bacteria in this group. While specific ecological roles or interactions are not detailed, Gram-negative bacteria such as A. troitsensis are often involved in nutrient cycling and may contribute to the degradation of organic materials in their ecosystems. The classification as Gram-negative suggests a distinctive cell wall structure, which influences its interactions with the environment and other microorganisms. This structural characteristic can confer advantages such as resistance to certain antibiotics and the ability to thrive in various ecological niches. In summary, Arenibacter troitsensis strain DSM 19835 exemplifies the diversity of marine bacteria, showcasing key traits such as its Gram-negative nature, rod shape, and single replicon genome. Understanding these features can provide insights into the ecological roles of similar bacteria in marine ecosystems, particularly in processes related to nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusArenibacter
SpeciesArenibacter troitsensis
Strainstrain DSM 19835

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenibacter troitsensis strain DSM 19835 genome assembly, contig:

Gene Summary

Adenine Count

1606259 bp

Thymine Count

1584636 bp

Guanine Count

1037243 bp

Cytosine Count

1051612 bp

Genome Length

5287600 bp

Protein-coding Genes

4360 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
starch-binding associating with outer membraneSAMN03080602_00027Not AvailablePositive41637 - 4310354907.8
concanavalin a-like lectin/glucanases superfamily proteinSAMN03080602_00028Not AvailablePositive43125 - 4484962547.4
type i phosphodiesterase / nucleotide pyrophosphataseSAMN03080602_00029Not AvailablePositive44983 - 4661458663.3
phosphonoacetate hydrolaseSAMN03080602_00030Not AvailablePositive46697 - 4791445028.9
aldehyde dehydrogenase (nad+)SAMN03080602_00031Not AvailablePositive47933 - 4936052168.4
aminotransferase class-vSAMN03080602_00032Not AvailablePositive49424 - 5011324792.3
2-aminoethylphosphonate-pyruvate transaminaseSAMN03080602_00033Not AvailablePositive50213 - 5053612977.5
sugar phosphate permeaseSAMN03080602_00034Not AvailablePositive50727 - 5199847018.6
4-methylaminobutanoate oxidase (formaldehyde-forming)SAMN03080602_00035Not AvailablePositive52054 - 5327744058.1
3',5'-cyclic amp phosphodiesterase cpdaSAMN03080602_00036Not AvailablePositive53297 - 5430138451.1

Displaying genes 31 – 40 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.