Rhizobium oryzae strain B4P

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Xaviernesmea

Description

Rhizobium oryzae strain B4P is characterized by having a single replicon, which is significant for its genomic organization and stability. The strain is cataloged under the accession number FXAF00000000.1, providing a reference point for researchers studying its genetic and functional properties. As a member of the Rhizobium genus, R. oryzae is likely involved in symbiotic relationships, particularly with leguminous plants. This symbiotic association is crucial for nitrogen fixation, a process that enhances soil fertility and supports plant growth. Although specific traits of strain B4P, such as its efficiency in nitrogen fixation or its host range, are not provided, the genus is known for its beneficial interactions with plants, suggesting that R. oryzae may contribute positively to agricultural ecosystems. Understanding the genomic characteristics of Rhizobium oryzae strain B4P can lead to insights into its metabolic capabilities and ecological roles. The presence of a single replicon may also indicate streamlined evolutionary adaptations, potentially enhancing its survival and efficiency in varied environments. Further research into this strain could elucidate its contributions to soil health and plant productivity, reinforcing the importance of microbial diversity in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusXaviernesmea
SpeciesXaviernesmea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium oryzae strain B4P genome assembly, contig:

Gene Summary

Adenine Count

1128943 bp

Thymine Count

1131630 bp

Guanine Count

1898444 bp

Cytosine Count

1906238 bp

Genome Length

6065255 bp

Protein-coding Genes

5641 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN02982989_4429Not AvailablePositive5993404 - 599440236703.3
peptide/bleomycin uptake transporterSAMN02982989_4430Not AvailableNegative5995053 - 599633348739.3
predicted arabinose efflux permease, mfs familySAMN02982989_4431Not AvailableNegative5996479 - 599766640228.0
hypothetical proteinSAMN02982989_4432Not AvailablePositive5997903 - 59981187956.59
hypothetical proteinSAMN02982989_4433Not AvailableNegative5998363 - 599865610812.0
methionyl aminopeptidaseSAMN02982989_4434Not AvailableNegative5998718 - 599947327264.4
probable oxidoreductase, llm familySAMN02982989_4435Not AvailableNegative5999533 - 600057637819.1
pas domain s-box-containing proteinSAMN02982989_4436Not AvailablePositive6000868 - 600308481515.9
chey chemotaxis protein or a chey-like rec (receiver) domainSAMN02982989_4437Not AvailablePositive6003089 - 600346313328.1
uncharacterized conserved protein yndb, ahsa1/start domainSAMN02982989_4438Not AvailableNegative6003567 - 600403717684.0

Displaying genes 5691 – 5700 of 5763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.