Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Xaviernesmea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Xaviernesmea |
| Species | Xaviernesmea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128943 bp
Thymine Count
1131630 bp
Guanine Count
1898444 bp
Cytosine Count
1906238 bp
Genome Length
6065255 bp
Protein-coding Genes
5641 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN02982989_4102 | Not Available | Negative | 5650602 - 5651060 | 16899.3 |
| trap transporter, dctm subunit | SAMN02982989_4103 | Not Available | Negative | 5651070 - 5652365 | 45602.4 |
| tripartite atp-independent transporter, dctq component | SAMN02982989_4104 | Not Available | Negative | 5652362 - 5652862 | 18548.9 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN02982989_4105 | Not Available | Negative | 5652939 - 5653973 | 37118.2 |
| d-lactate dehydrogenase (cytochrome) | SAMN02982989_4106 | Not Available | Positive | 5654523 - 5655911 | 49547.3 |
| vanillate/3-o-methylgallate o-demethylase | SAMN02982989_4107 | Not Available | Negative | 5655964 - 5657370 | 52715.7 |
| iron(iii) transport system atp-binding protein | SAMN02982989_4108 | Not Available | Negative | 5657559 - 5658653 | 40154.3 |
| iron(iii) transport system permease protein | SAMN02982989_4109 | Not Available | Negative | 5658740 - 5660506 | 65654.3 |
| iron(iii) transport system substrate-binding protein | SAMN02982989_4110 | Not Available | Negative | 5660580 - 5661641 | 39253.3 |
| dna-binding transcriptional regulator, lysr family | SAMN02982989_4111 | Not Available | Positive | 5662164 - 5663090 | 33834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
