Rhizobium oryzae strain B4P

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Xaviernesmea

Description

Rhizobium oryzae strain B4P is characterized by having a single replicon, which is significant for its genomic organization and stability. The strain is cataloged under the accession number FXAF00000000.1, providing a reference point for researchers studying its genetic and functional properties. As a member of the Rhizobium genus, R. oryzae is likely involved in symbiotic relationships, particularly with leguminous plants. This symbiotic association is crucial for nitrogen fixation, a process that enhances soil fertility and supports plant growth. Although specific traits of strain B4P, such as its efficiency in nitrogen fixation or its host range, are not provided, the genus is known for its beneficial interactions with plants, suggesting that R. oryzae may contribute positively to agricultural ecosystems. Understanding the genomic characteristics of Rhizobium oryzae strain B4P can lead to insights into its metabolic capabilities and ecological roles. The presence of a single replicon may also indicate streamlined evolutionary adaptations, potentially enhancing its survival and efficiency in varied environments. Further research into this strain could elucidate its contributions to soil health and plant productivity, reinforcing the importance of microbial diversity in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusXaviernesmea
SpeciesXaviernesmea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium oryzae strain B4P genome assembly, contig:

Gene Summary

Adenine Count

1128943 bp

Thymine Count

1131630 bp

Guanine Count

1898444 bp

Cytosine Count

1906238 bp

Genome Length

6065255 bp

Protein-coding Genes

5641 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
invasion protein ialb, involved in pathogenesisSAMN02982989_3757Not AvailablePositive5299611 - 530026122835.8
heat shock protein hspqSAMN02982989_3758Not AvailableNegative5300375 - 530070412727.9
uncharacterized membrane proteinSAMN02982989_3759Not AvailableNegative5300799 - 530172233721.1
l-glutamine synthetaseSAMN02982989_3760Not AvailableNegative5301828 - 530323752146.1
nitrogen regulatory protein p-ii familySAMN02982989_3761Not AvailableNegative5303297 - 530363512267.8
nad(p)h-hydrate epimeraseSAMN02982989_3762Not AvailablePositive5303979 - 530546050868.2
uncharacterized conserved protein yece, duf72 familySAMN02982989_3763Not AvailableNegative5305457 - 530626930431.5
excinuclease abc subunit aSAMN02982989_3764Not AvailableNegative5306292 - 5309213107011.0
single-strand dna-binding proteinSAMN02982989_3765Not AvailablePositive5309461 - 531002419946.9
cbs domain-containing membrane proteinSAMN02982989_3766Not AvailableNegative5310105 - 531125040828.9

Displaying genes 5031 – 5040 of 5763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.