Rhizobium oryzae strain B4P

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Xaviernesmea

Description

Rhizobium oryzae strain B4P is characterized by having a single replicon, which is significant for its genomic organization and stability. The strain is cataloged under the accession number FXAF00000000.1, providing a reference point for researchers studying its genetic and functional properties. As a member of the Rhizobium genus, R. oryzae is likely involved in symbiotic relationships, particularly with leguminous plants. This symbiotic association is crucial for nitrogen fixation, a process that enhances soil fertility and supports plant growth. Although specific traits of strain B4P, such as its efficiency in nitrogen fixation or its host range, are not provided, the genus is known for its beneficial interactions with plants, suggesting that R. oryzae may contribute positively to agricultural ecosystems. Understanding the genomic characteristics of Rhizobium oryzae strain B4P can lead to insights into its metabolic capabilities and ecological roles. The presence of a single replicon may also indicate streamlined evolutionary adaptations, potentially enhancing its survival and efficiency in varied environments. Further research into this strain could elucidate its contributions to soil health and plant productivity, reinforcing the importance of microbial diversity in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusXaviernesmea
SpeciesXaviernesmea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium oryzae strain B4P genome assembly, contig:

Gene Summary

Adenine Count

1128943 bp

Thymine Count

1131630 bp

Guanine Count

1898444 bp

Cytosine Count

1906238 bp

Genome Length

6065255 bp

Protein-coding Genes

5641 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multiple sugar transport system atp-binding proteinSAMN02982989_1438Not AvailableNegative2455083 - 245617139971.4
glucose/mannose transport system permease proteinSAMN02982989_1439Not AvailableNegative2456178 - 245709533254.8
glucose/mannose transport system permease proteinSAMN02982989_1440Not AvailableNegative2457100 - 245798133021.2
glucose/mannose transport system substrate-binding proteinSAMN02982989_1441Not AvailableNegative2458053 - 245929444868.3
laci family transcriptional regulatorSAMN02982989_1442Not AvailableNegative2459685 - 246071337399.8
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunitSAMN02982989_1443Not AvailablePositive2460896 - 246130914941.7
hypothetical proteinSAMN02982989_1444Not AvailablePositive2461344 - 246240839927.8
hypothetical proteinSAMN02982989_1445Not AvailablePositive2462405 - 246351742521.2
dihydroxyacetone kinase, n-terminal domainSAMN02982989_1446Not AvailablePositive2463531 - 246452935092.1
dihydroxyacetone kinase, c-terminal domainSAMN02982989_1447Not AvailablePositive2464529 - 246516121497.8

Displaying genes 2361 – 2370 of 5763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.