Pseudomonas sp. URMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I5 is characterized by a single replicon, indicating a streamlined genomic structure that may enhance its adaptability and survival in various environments. The organism is cataloged under the accession number FXAD00000000.1, which is crucial for referencing its genetic information in databases. As a member of the Pseudomonas genus, this strain is expected to exhibit metabolic versatility, enabling it to thrive in diverse ecological niches. Pseudomonas species are well-known for their ability to degrade a wide range of organic compounds, which can contribute to bioremediation efforts and nutrient cycling in ecosystems. The genomic characteristics of Pseudomonas sp. URMO17WK12:I5, particularly its singular replicon, may suggest an efficient regulatory mechanism for gene expression and replication, enabling rapid responses to environmental changes. This trait is advantageous for survival in fluctuating habitats where resource availability can be variable. Understanding the specific traits of Pseudomonas sp. URMO17WK12:I5 can provide insights into its ecological role, particularly in the context of nutrient cycling and bioremediation. Its potential applications in environmental microbiology highlight the importance of studying such microorganisms, as they can offer solutions for managing pollutants and enhancing ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1068906 bp

Thymine Count

1071744 bp

Guanine Count

1804433 bp

Cytosine Count

1808712 bp

Genome Length

5759395 bp

Protein-coding Genes

5187 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-methylcitrate dehydratase prpdSAMN02745903_04122Not AvailableNegative4414934 - 441628347943.0
acyl-coa dehydrogenaseSAMN02745903_04123Not AvailableNegative4416294 - 441745742721.8
itaconyl-coa hydratase / mesaconyl-c4 coa hydrataseSAMN02745903_04124Not AvailableNegative4417479 - 441831830804.5
dna-binding transcriptional regulator, lysr familySAMN02745903_04125Not AvailablePositive4418460 - 441934732298.6
protein of unknown functionSAMN02745903_04126Not AvailablePositive4419695 - 442022219537.4
anti-ecfsigma factor, chrrSAMN02745903_04127Not AvailableNegative4420217 - 442086123083.5
hypothetical proteinSAMN02745903_04128Not AvailablePositive4421186 - 44213746353.23
conserved hypothetical proteinSAMN02745903_04129Not AvailableNegative4421371 - 442209025854.5
aerobic c4-dicarboxylate transport proteinSAMN02745903_04130Not AvailableNegative4422210 - 442349945694.3
glycerate dehydrogenaseSAMN02745903_04131Not AvailableNegative4423669 - 442461033138.2

Displaying genes 4081 – 4090 of 5321 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.