Pseudomonas sp. URMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I5 is characterized by a single replicon, indicating a streamlined genomic structure that may enhance its adaptability and survival in various environments. The organism is cataloged under the accession number FXAD00000000.1, which is crucial for referencing its genetic information in databases. As a member of the Pseudomonas genus, this strain is expected to exhibit metabolic versatility, enabling it to thrive in diverse ecological niches. Pseudomonas species are well-known for their ability to degrade a wide range of organic compounds, which can contribute to bioremediation efforts and nutrient cycling in ecosystems. The genomic characteristics of Pseudomonas sp. URMO17WK12:I5, particularly its singular replicon, may suggest an efficient regulatory mechanism for gene expression and replication, enabling rapid responses to environmental changes. This trait is advantageous for survival in fluctuating habitats where resource availability can be variable. Understanding the specific traits of Pseudomonas sp. URMO17WK12:I5 can provide insights into its ecological role, particularly in the context of nutrient cycling and bioremediation. Its potential applications in environmental microbiology highlight the importance of studying such microorganisms, as they can offer solutions for managing pollutants and enhancing ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1068906 bp

Thymine Count

1071744 bp

Guanine Count

1804433 bp

Cytosine Count

1808712 bp

Genome Length

5759395 bp

Protein-coding Genes

5187 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pimeloyl-acp methyl ester carboxylesteraseSAMN02745903_03981Not AvailablePositive4253998 - 425490334257.4
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN02745903_03982Not AvailablePositive4255019 - 425592132172.2
transcriptional regulator, iclr familySAMN02745903_03983Not AvailableNegative4256131 - 425691327467.0
homogentisate 1,2-dioxygenaseSAMN02745903_03984Not AvailablePositive4257027 - 425832848121.3
fumarylacetoacetate hydrolaseSAMN02745903_03985Not AvailablePositive4258332 - 425962446328.3
maleylacetoacetate isomeraseSAMN02745903_03986Not AvailablePositive4259636 - 426026822883.4
regulator of sirc expression, contains transglutaminase-like and tpr domainsSAMN02745903_03987Not AvailableNegative4260262 - 426106829933.7
leucine dehydrogenaseSAMN02745903_03988Not AvailablePositive4261193 - 426221235540.9
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN02745903_03989Not AvailableNegative4262231 - 426310633700.4
hypothetical proteinSAMN02745903_03990Not AvailablePositive4263454 - 426372010096.7

Displaying genes 3941 – 3950 of 5321 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.