Pseudomonas sp. URMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I5 is characterized by a single replicon, indicating a streamlined genomic structure that may enhance its adaptability and survival in various environments. The organism is cataloged under the accession number FXAD00000000.1, which is crucial for referencing its genetic information in databases. As a member of the Pseudomonas genus, this strain is expected to exhibit metabolic versatility, enabling it to thrive in diverse ecological niches. Pseudomonas species are well-known for their ability to degrade a wide range of organic compounds, which can contribute to bioremediation efforts and nutrient cycling in ecosystems. The genomic characteristics of Pseudomonas sp. URMO17WK12:I5, particularly its singular replicon, may suggest an efficient regulatory mechanism for gene expression and replication, enabling rapid responses to environmental changes. This trait is advantageous for survival in fluctuating habitats where resource availability can be variable. Understanding the specific traits of Pseudomonas sp. URMO17WK12:I5 can provide insights into its ecological role, particularly in the context of nutrient cycling and bioremediation. Its potential applications in environmental microbiology highlight the importance of studying such microorganisms, as they can offer solutions for managing pollutants and enhancing ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1068906 bp

Thymine Count

1071744 bp

Guanine Count

1804433 bp

Cytosine Count

1808712 bp

Genome Length

5759395 bp

Protein-coding Genes

5187 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein virb5SAMN02745903_03860Not AvailablePositive4122413 - 412317728643.8
hypothetical proteinSAMN02745903_03861Not AvailablePositive4123667 - 41239219507.22
type iv secretion system protein virb6SAMN02745903_03862Not AvailablePositive4123924 - 412500338462.5
hypothetical proteinSAMN02745903_03863Not AvailableNegative4125754 - 412658731173.3
site-specific recombinase xerdSAMN02745903_03864Not AvailableNegative4127047 - 412811140064.6
Trna-metNot AvailableNot AvailablePositive4128238 - 4128314Not Available
periplasmic sensor diguanylate cyclase/phosphodiesteraseSAMN02745903_03866Not AvailableNegative4128331 - 4132074139593.0
rna polymerase, sigma 70 subunit, rpodSAMN02745903_03867Not AvailableNegative4132193 - 413404369198.3
dna primaseSAMN02745903_03868Not AvailableNegative4134111 - 413609373755.4
ssu ribosomal protein s21pSAMN02745903_03869Not AvailableNegative4136379 - 41365948370.25

Displaying genes 3821 – 3830 of 5321 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.