Pseudomonas sp. URMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I5 is characterized by a single replicon, indicating a streamlined genomic structure that may enhance its adaptability and survival in various environments. The organism is cataloged under the accession number FXAD00000000.1, which is crucial for referencing its genetic information in databases. As a member of the Pseudomonas genus, this strain is expected to exhibit metabolic versatility, enabling it to thrive in diverse ecological niches. Pseudomonas species are well-known for their ability to degrade a wide range of organic compounds, which can contribute to bioremediation efforts and nutrient cycling in ecosystems. The genomic characteristics of Pseudomonas sp. URMO17WK12:I5, particularly its singular replicon, may suggest an efficient regulatory mechanism for gene expression and replication, enabling rapid responses to environmental changes. This trait is advantageous for survival in fluctuating habitats where resource availability can be variable. Understanding the specific traits of Pseudomonas sp. URMO17WK12:I5 can provide insights into its ecological role, particularly in the context of nutrient cycling and bioremediation. Its potential applications in environmental microbiology highlight the importance of studying such microorganisms, as they can offer solutions for managing pollutants and enhancing ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1068906 bp

Thymine Count

1071744 bp

Guanine Count

1804433 bp

Cytosine Count

1808712 bp

Genome Length

5759395 bp

Protein-coding Genes

5187 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator, lysr familySAMN02745903_03337Not AvailableNegative3557870 - 355879034288.2
tartrate dehydrogenase/decarboxylase / d-malate dehydrogenaseSAMN02745903_03338Not AvailablePositive3558912 - 355997037991.4
hypothetical proteinSAMN02745903_03339Not AvailableNegative3559973 - 356055121577.5
cob(i)yrinic acid a,c-diamide adenosyltransferaseSAMN02745903_03341Not AvailablePositive3561059 - 356167022643.3
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthaseSAMN02745903_03342Not AvailablePositive3561667 - 356296245815.2
cob(ii)yrinic acid a,c-diamide reductaseSAMN02745903_03343Not AvailablePositive3562959 - 356360923765.8
adenosylcobinamide-phosphate synthaseSAMN02745903_03344Not AvailablePositive3563606 - 356451432806.8
l-threonine o-3-phosphate decarboxylaseSAMN02745903_03345Not AvailablePositive3564507 - 356549936103.2
adenosylcobyric acid synthase (glutamine-hydrolysing)SAMN02745903_03346Not AvailablePositive3565496 - 356695051576.4
adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferaseSAMN02745903_03347Not AvailablePositive3566952 - 356747318966.2

Displaying genes 3311 – 3320 of 5321 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.