Pseudomonas sp. URMO17WK12:I5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I5 is characterized by a single replicon, indicating a streamlined genomic structure that may enhance its adaptability and survival in various environments. The organism is cataloged under the accession number FXAD00000000.1, which is crucial for referencing its genetic information in databases. As a member of the Pseudomonas genus, this strain is expected to exhibit metabolic versatility, enabling it to thrive in diverse ecological niches. Pseudomonas species are well-known for their ability to degrade a wide range of organic compounds, which can contribute to bioremediation efforts and nutrient cycling in ecosystems. The genomic characteristics of Pseudomonas sp. URMO17WK12:I5, particularly its singular replicon, may suggest an efficient regulatory mechanism for gene expression and replication, enabling rapid responses to environmental changes. This trait is advantageous for survival in fluctuating habitats where resource availability can be variable. Understanding the specific traits of Pseudomonas sp. URMO17WK12:I5 can provide insights into its ecological role, particularly in the context of nutrient cycling and bioremediation. Its potential applications in environmental microbiology highlight the importance of studying such microorganisms, as they can offer solutions for managing pollutants and enhancing ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I5 genome assembly, contig:

Gene Summary

Adenine Count

1068906 bp

Thymine Count

1071744 bp

Guanine Count

1804433 bp

Cytosine Count

1808712 bp

Genome Length

5759395 bp

Protein-coding Genes

5187 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator of acetoin/glycerol metabolismSAMN02745903_02515Not AvailableNegative2701570 - 270354672801.2
aldehyde dehydrogenaseSAMN02745903_02516Not AvailablePositive2703791 - 270531155315.4
ethanolamine:proton symporter, eat familySAMN02745903_02517Not AvailablePositive2705521 - 270696950763.8
ethanolamine ammonia-lyase heavy chainSAMN02745903_02518Not AvailablePositive2707016 - 270841050053.1
ethanolamine ammonia-lyase light chainSAMN02745903_02519Not AvailablePositive2708420 - 270925030236.9
ribosomal protein s18 acetylase rimiSAMN02745903_02520Not AvailablePositive2709360 - 270981817807.6
membrane-associated proteinSAMN02745903_02521Not AvailablePositive2710089 - 271073623592.5
hypothetical proteinSAMN02745903_02522Not AvailablePositive2710745 - 271156031189.5
inorganic pyrophosphataseSAMN02745903_02523Not AvailablePositive2711666 - 271219319189.9
phage repressor protein c, contains cro/c1-type hth and peptisase s24 domainsSAMN02745903_02524Not AvailablePositive2712370 - 271306826242.7

Displaying genes 2501 – 2510 of 5321 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.