Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mo-nitrogenase mofe protein subunit nifk | SAMN06295933_0943 | Not Available | Positive | 971401 - 972774 | 50240.9 |
| nitrogen fixation protein nifb | SAMN06295933_0944 | Not Available | Positive | 972892 - 974037 | 40701.2 |
| (2fe-2s) ferredoxin | SAMN06295933_0945 | Not Available | Positive | 974081 - 974383 | 11146.3 |
| ribosomal protein s18 acetylase rimi | SAMN06295933_0946 | Not Available | Positive | 974398 - 974853 | 16728.5 |
| nitrogenase molybdenum-cofactor synthesis protein nife | SAMN06295933_0947 | Not Available | Positive | 974864 - 976249 | 50902.5 |
| nitrogenase molybdenum-iron protein nifn | SAMN06295933_0948 | Not Available | Positive | 976242 - 977615 | 49876.0 |
| nitrogen fixation protein nifb | SAMN06295933_0949 | Not Available | Positive | 977667 - 978935 | 45135.5 |
| nif-specific regulatory protein | SAMN06295933_0950 | Not Available | Negative | 979106 - 980725 | 60867.8 |
| hypothetical protein | SAMN06295933_0951 | Not Available | Negative | 980969 - 981232 | 9752.0 |
| pep-cterm protein-sorting domain-containing protein | SAMN06295933_0952 | Not Available | Negative | 981302 - 981889 | 21045.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

