Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lectin c-type domain-containing protein | SAMN06295933_0706 | Not Available | Positive | 735688 - 736254 | 20847.5 |
| hydrogenase expression/formation protein hypc | SAMN06295933_0707 | Not Available | Negative | 736361 - 736618 | 9293.21 |
| hydrogenase maturation protease | SAMN06295933_0708 | Not Available | Negative | 736650 - 737138 | 17607.4 |
| [nife] hydrogenase large subunit | SAMN06295933_0709 | Not Available | Negative | 737212 - 738921 | 63076.1 |
| [nife] hydrogenase small subunit | SAMN06295933_0710 | Not Available | Negative | 738981 - 739928 | 33804.3 |
| thymidylate kinase | SAMN06295933_0711 | Not Available | Negative | 740454 - 741098 | 24209.1 |
| 3'-5' exoribonuclease | SAMN06295933_0712 | Not Available | Negative | 741074 - 742108 | 39363.3 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN06295933_0713 | Not Available | Positive | 742258 - 743013 | 27610.2 |
| fructose-bisphosphate aldolase | SAMN06295933_0714 | Not Available | Positive | 743217 - 744140 | 32991.6 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN06295933_0715 | Not Available | Positive | 744194 - 745180 | 35240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

