Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | SAMN06295933_0666 | Not Available | Positive | 691236 - 691802 | 20431.9 |
| tetratricopeptide repeat-containing protein | SAMN06295933_0667 | Not Available | Positive | 692423 - 694516 | 78178.5 |
| hypothetical protein | SAMN06295933_0668 | Not Available | Negative | 694565 - 695728 | 43811.6 |
| trk system potassium uptake protein trkh | SAMN06295933_0669 | Not Available | Negative | 695796 - 697250 | 53085.9 |
| trk system potassium uptake protein trka | SAMN06295933_0670 | Not Available | Negative | 697250 - 698614 | 49744.8 |
| ssu ribosomal protein s20p | SAMN06295933_0671 | Not Available | Negative | 698826 - 699089 | 9580.74 |
| glycyl-trna synthetase beta chain | SAMN06295933_0672 | Not Available | Negative | 699267 - 701360 | 77189.5 |
| glycyl-trna synthetase alpha chain | SAMN06295933_0673 | Not Available | Negative | 701378 - 702250 | 33407.3 |
| dna replication and repair protein reco | SAMN06295933_0674 | Not Available | Negative | 702461 - 703201 | 27568.0 |
| protein rodz, contains xre-like hth and duf4115 domains | SAMN06295933_0675 | Not Available | Negative | 703221 - 704132 | 33074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

