Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative methionine transporter, nhac family | SAMN06295933_0616 | Not Available | Positive | 640381 - 641685 | 45300.0 |
| class iii cytochrome c family protein | SAMN06295933_0617 | Not Available | Negative | 641806 - 642231 | 15485.9 |
| formate dehydrogenase iron-sulfur subunit | SAMN06295933_0618 | Not Available | Negative | 642256 - 643011 | 28081.0 |
| formate dehydrogenase alpha subunit | SAMN06295933_0619 | Not Available | Negative | 643011 - 645434 | 91001.4 |
| formate dehydrogenase major subunit | SAMN06295933_0620 | Not Available | Negative | 645483 - 646070 | 21372.6 |
| aminomethyltransferase | SAMN06295933_0621 | Not Available | Negative | 646852 - 647913 | 39251.6 |
| hypothetical protein | SAMN06295933_0622 | Not Available | Negative | 647980 - 649725 | 68363.5 |
| hypothetical protein | SAMN06295933_0623 | Not Available | Positive | 650002 - 650217 | 8436.95 |
| gaf domain-containing protein | SAMN06295933_0624 | Not Available | Positive | 650221 - 651249 | 37865.0 |
| rod shape-determining protein mreb | SAMN06295933_0625 | Not Available | Positive | 651276 - 652301 | 36729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

