Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s21 | SAMN06295933_0454 | Not Available | Positive | 466644 - 466844 | 7802.8 |
| hypothetical protein | SAMN06295933_0455 | Not Available | Positive | 466848 - 467291 | 16029.3 |
| dna mismatch repair protein muts2 | SAMN06295933_0456 | Not Available | Positive | 467424 - 469724 | 84767.9 |
| dna primase | SAMN06295933_0457 | Not Available | Positive | 469795 - 471525 | 64317.5 |
| rna polymerase, sigma 70 subunit, rpod | SAMN06295933_0458 | Not Available | Positive | 471512 - 473281 | 68061.1 |
| adenosylcobinamide-phosphate synthase | SAMN06295933_0459 | Not Available | Positive | 473427 - 474377 | 34483.6 |
| pyrroline-5-carboxylate reductase | SAMN06295933_0460 | Not Available | Negative | 474482 - 475285 | 28625.6 |
| nucleoside diphosphate kinase | SAMN06295933_0461 | Not Available | Negative | 475287 - 475760 | 17261.8 |
| putative abc transport system atp-binding protein | SAMN06295933_0462 | Not Available | Negative | 475796 - 476590 | 28955.4 |
| putative abc transport system permease protein | SAMN06295933_0463 | Not Available | Negative | 476590 - 477495 | 31268.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

