Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfp pilus assembly protein pilf | SAMN06295933_0391 | Not Available | Positive | 404530 - 406905 | 89018.6 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN06295933_0392 | Not Available | Positive | 407065 - 408456 | 52477.7 |
| adenylylsulfate kinase | SAMN06295933_0393 | Not Available | Positive | 408471 - 408989 | 19514.5 |
| polysaccharide export outer membrane protein | SAMN06295933_0394 | Not Available | Positive | 409026 - 409604 | 20779.4 |
| uncharacterized protein, pep-cterm system associated | SAMN06295933_0395 | Not Available | Positive | 409671 - 411317 | 61921.6 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN06295933_0396 | Not Available | Positive | 411333 - 413084 | 66638.8 |
| exopolysaccharide/pep-cterm locus tyrosine autokinase | SAMN06295933_0397 | Not Available | Positive | 413103 - 414035 | 34548.9 |
| type ii secretion system protein a | SAMN06295933_0398 | Not Available | Positive | 414047 - 415030 | 36962.8 |
| heparinase ii/iii-like protein | SAMN06295933_0399 | Not Available | Positive | 415045 - 416976 | 72000.1 |
| hypothetical protein | SAMN06295933_0400 | Not Available | Positive | 417031 - 418278 | 45465.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

