Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding module 48 (isoamylase n-terminal domain) | SAMN06295933_0381 | Not Available | Positive | 390076 - 390384 | 11553.6 |
| branched chain amino acid aminotransferase apoenzyme | SAMN06295933_0382 | Not Available | Positive | 390593 - 391516 | 34091.2 |
| dna polymerase-3 subunit gamma/tau | SAMN06295933_0383 | Not Available | Positive | 391571 - 393583 | 72076.0 |
| hypothetical protein | SAMN06295933_0384 | Not Available | Positive | 393634 - 393945 | 11166.7 |
| dna replication and repair protein recr | SAMN06295933_0385 | Not Available | Positive | 394054 - 394659 | 22190.2 |
| exodeoxyribonuclease v alpha subunit | SAMN06295933_0386 | Not Available | Positive | 394783 - 396975 | 81598.0 |
| diguanylate cyclase/phosphodiesterase | SAMN06295933_0387 | Not Available | Negative | 397004 - 399274 | 84909.9 |
| o-antigen ligase | SAMN06295933_0388 | Not Available | Positive | 399581 - 400834 | 48509.9 |
| heparinase ii/iii n-terminus | SAMN06295933_0389 | Not Available | Positive | 400861 - 402834 | 74261.3 |
| exosortase d, vplpa-cterm-specific | SAMN06295933_0390 | Not Available | Positive | 402969 - 404477 | 56675.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

