Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing system atp-binding protein | SAMN06295933_0321 | Not Available | Positive | 328189 - 328872 | 24770.2 |
| beta-barrel assembly machine subunit bama | SAMN06295933_0322 | Not Available | Positive | 328859 - 331573 | 100541.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06295933_0323 | Not Available | Positive | 331676 - 332203 | 19984.4 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN06295933_0324 | Not Available | Positive | 332210 - 333238 | 35554.1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN06295933_0325 | Not Available | Positive | 333240 - 333704 | 17239.4 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN06295933_0326 | Not Available | Positive | 333704 - 334501 | 28436.2 |
| hypothetical protein | SAMN06295933_0327 | Not Available | Positive | 334467 - 335336 | 31117.8 |
| putative regulatory protein, fmdb family | SAMN06295933_0328 | Not Available | Negative | 335419 - 335664 | 8380.91 |
| mind superfamily p-loop atpase, contains an inserted ferredoxin domain | SAMN06295933_0329 | Not Available | Negative | 335762 - 336619 | 30490.8 |
| mind superfamily p-loop atpase, contains an inserted ferredoxin domain | SAMN06295933_0330 | Not Available | Negative | 336620 - 337480 | 30795.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

