Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295933_0211 | Not Available | Negative | 226077 - 227111 | 38432.9 |
| pas domain s-box-containing protein | SAMN06295933_0212 | Not Available | Positive | 227290 - 229938 | 98936.3 |
| two-component system, ntrc family, response regulator | SAMN06295933_0213 | Not Available | Positive | 229931 - 231397 | 53955.2 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN06295933_0214 | Not Available | Positive | 231795 - 235319 | 127887.0 |
| lactate permease | SAMN06295933_0215 | Not Available | Positive | 235524 - 237236 | 60667.8 |
| glycolate oxidase | SAMN06295933_0216 | Not Available | Positive | 237340 - 238725 | 49030.1 |
| glycolate oxidase iron-sulfur subunit | SAMN06295933_0217 | Not Available | Positive | 238726 - 240024 | 47086.5 |
| phosphotransacetylase | SAMN06295933_0218 | Not Available | Positive | 240223 - 242340 | 76885.1 |
| acetate kinase | SAMN06295933_0219 | Not Available | Positive | 242340 - 243548 | 43457.4 |
| l-lactate dehydrogenase complex protein lldg | SAMN06295933_0220 | Not Available | Positive | 243767 - 244393 | 22373.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

