Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase | SAMN06295933_2159 | Not Available | Positive | 2327028 - 2327501 | 17033.4 |
| starch synthase | SAMN06295933_2160 | Not Available | Positive | 2327552 - 2329000 | 54698.3 |
| hypothetical protein | SAMN06295933_2161 | Not Available | Positive | 2329009 - 2329212 | 7635.14 |
| 1,4-alpha-glucan branching enzyme | SAMN06295933_2162 | Not Available | Positive | 2329219 - 2331117 | 72662.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN06295933_2163 | Not Available | Positive | 2331371 - 2332354 | 35294.8 |
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | SAMN06295933_2164 | Not Available | Negative | 2332477 - 2333010 | 19365.2 |
| tetratricopeptide repeat-containing protein | SAMN06295933_2165 | Not Available | Negative | 2333141 - 2333941 | 30652.3 |
| carbamoyl-phosphate synthase small subunit | SAMN06295933_2166 | Not Available | Negative | 2333974 - 2335098 | 40981.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN06295933_2167 | Not Available | Negative | 2335095 - 2335838 | 27083.7 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN06295933_2168 | Not Available | Negative | 2335851 - 2337128 | 47616.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

